Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TK1Thymidine kinase. (223 aa)    
Predicted Functional Partners:
TYMS
Thymidylate synthase.
  
 
 0.995
CDA
Cytidine deaminase isoform X1.
    
 0.984
DTYMK
Thymidylate kinase.
  
 
 0.983
TYMP
Thymidine phosphorylase.
    
 0.983
TK2
Thymidine kinase 2, mitochondrial.
  
 
 0.982
DCTD
Deoxycytidylate deaminase.
  
 
 0.969
DUT
Deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial.
   
 
 0.954
NT5M
5'(3')-deoxyribonucleotidase, mitochondrial.
     
 0.931
UPP1
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
     
 0.920
UPP2
Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
     
 0.920
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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