STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC34Leucine-rich repeat-containing protein 34. (347 aa)    
Predicted Functional Partners:
MYNN
Myoneurin.
     
 0.638
RSPH14
Rhabdoid tumor deletion region protein 1.
    
 
 0.610
INSYN2B
Protein FAM196B.
    
 
 0.601
CFAP161
Uncharacterized protein C15orf26.
   
  
 0.566
DLEC1
DLEC1 cilia and flagella associated protein.
    
 0.565
LRRC23
Leucine-rich repeat-containing protein 23.
   
  
 0.549
CCDC146_1
Coiled-coil domain-containing protein 146.
      
 0.547
LOC110482908
Phosphodiesterase.
   
    0.545
LYPD6
Ly6/PLAUR domain-containing protein 6.
   
  
 0.538
SAXO2
Protein FAM154B.
      
 0.534
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.