STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LZTFL1Leucine zipper transcription factor-like protein 1. (297 aa)    
Predicted Functional Partners:
BBS2
Bardet-Biedl syndrome 2 protein homolog.
   
 0.926
BBS9
Protein PTHB1.
    
 0.919
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.914
BBS4
Bardet-Biedl syndrome 4 protein.
   
 0.881
TTC8
Tetratricopeptide repeat protein 8.
   
 0.875
BBS5
Bardet-Biedl syndrome 5.
   
 0.732
KLHL41
Kelch-like protein 41.
   
 0.732
SMO
Smoothened; Belongs to the G-protein coupled receptor Fz/Smo family.
    
 0.685
KLHL40
Kelch-like protein 40.
   
 0.669
SLC6A20
Sodium-and chloride-dependent transporter XTRP3.
 
    
 0.590
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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