Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMX1Thioredoxin-related transmembrane protein 1. (285 aa)    
Predicted Functional Partners:
TMX3
Protein disulfide-isomerase TMX3.
   
 
 0.778
TMX2
Thioredoxin-related transmembrane protein 2.
    
 
 0.698
HSPA5
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.680
GRAMD1C
GRAM domain-containing protein 1C.
    
 
 0.643
CYSTM1
Cysteine-rich and transmembrane domain-containing protein 1.
    
   0.630
NDUFB11
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial.
   
 
 0.587
TRMT1L
TRMT1-like protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.585
CCDC90B
Coiled-coil domain-containing protein 90B, mitochondrial.
      
 0.576
TXNDC15
Thioredoxin domain-containing protein 15.
      
 0.573
MGST3
Microsomal glutathione S-transferase 3.
    
 0.573
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.