STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KBTBD2Kelch repeat and BTB domain-containing protein 2. (623 aa)    
Predicted Functional Partners:
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
      
 0.558
TMEM47
Transmembrane protein 47.
      
 0.530
AVL9
Late secretory pathway protein AVL9.
      
 0.523
DCAF6
DDB1-and CUL4-associated factor 6.
      
 0.483
ANAPC13
Anaphase-promoting complex subunit 13.
      
 0.480
ZCRB1
Zinc finger CCHC-type and RNA-binding motif-containing protein 1.
      
 0.478
IPO13
Importin-13.
      
 0.477
BBS9
Protein PTHB1.
    
 0.471
MIB2
E3 ubiquitin-protein ligase MIB2.
    
 0.435
UBXN7
UBX domain-containing protein 7.
    
  0.425
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.