GCN1 protein (Lonchura striata) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

GCN1

Translational activator GCN1. (2652 aa)

Predicted Functional Partners:

ABCF3

0.982

DRG2

0.938

RPL19

0.932

RPS15

0.916

RPS13

0.908

RPS2

0.900

RPS9

0.900

RPS3

0.892

RACK1

0.890

RPL15

0.886

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCF3	DRG2	ENSLSDP00000000453	ENSLSDP00000009821	ATP-binding cassette sub-family F member 3.	Developmentally-regulated GTP-binding protein 2.	0.492
ABCF3	GCN1	ENSLSDP00000000453	ENSLSDP00000003976	ATP-binding cassette sub-family F member 3.	Translational activator GCN1.	0.982
ABCF3	RACK1	ENSLSDP00000000453	ENSLSDP00000011405	ATP-binding cassette sub-family F member 3.	Guanine nucleotide-binding protein subunit beta-2-like 1.	0.440
ABCF3	RPS13	ENSLSDP00000000453	ENSLSDP00000006352	ATP-binding cassette sub-family F member 3.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.608
ABCF3	RPS15	ENSLSDP00000000453	ENSLSDP00000015884	ATP-binding cassette sub-family F member 3.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.679
ABCF3	RPS2	ENSLSDP00000000453	ENSLSDP00000014612	ATP-binding cassette sub-family F member 3.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.597
ABCF3	RPS3	ENSLSDP00000000453	ENSLSDP00000013211	ATP-binding cassette sub-family F member 3.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.695
ABCF3	RPS9	ENSLSDP00000000453	ENSLSDP00000015628	ATP-binding cassette sub-family F member 3.	40S ribosomal protein S9.	0.651
DRG2	ABCF3	ENSLSDP00000009821	ENSLSDP00000000453	Developmentally-regulated GTP-binding protein 2.	ATP-binding cassette sub-family F member 3.	0.492
DRG2	GCN1	ENSLSDP00000009821	ENSLSDP00000003976	Developmentally-regulated GTP-binding protein 2.	Translational activator GCN1.	0.938
DRG2	RACK1	ENSLSDP00000009821	ENSLSDP00000011405	Developmentally-regulated GTP-binding protein 2.	Guanine nucleotide-binding protein subunit beta-2-like 1.	0.599
DRG2	RPL15	ENSLSDP00000009821	ENSLSDP00000019312	Developmentally-regulated GTP-binding protein 2.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.649
DRG2	RPL19	ENSLSDP00000009821	ENSLSDP00000003840	Developmentally-regulated GTP-binding protein 2.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.544
DRG2	RPS13	ENSLSDP00000009821	ENSLSDP00000006352	Developmentally-regulated GTP-binding protein 2.	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.	0.594
DRG2	RPS15	ENSLSDP00000009821	ENSLSDP00000015884	Developmentally-regulated GTP-binding protein 2.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.668
DRG2	RPS2	ENSLSDP00000009821	ENSLSDP00000014612	Developmentally-regulated GTP-binding protein 2.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.668
DRG2	RPS3	ENSLSDP00000009821	ENSLSDP00000013211	Developmentally-regulated GTP-binding protein 2.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.730
DRG2	RPS9	ENSLSDP00000009821	ENSLSDP00000015628	Developmentally-regulated GTP-binding protein 2.	40S ribosomal protein S9.	0.576
GCN1	ABCF3	ENSLSDP00000003976	ENSLSDP00000000453	Translational activator GCN1.	ATP-binding cassette sub-family F member 3.	0.982
GCN1	DRG2	ENSLSDP00000003976	ENSLSDP00000009821	Translational activator GCN1.	Developmentally-regulated GTP-binding protein 2.	0.938