Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDR34WD repeat-containing protein 34. (528 aa)    
Predicted Functional Partners:
WDR60
WD repeat-containing protein 60.
    
0.998
DYNC2LI1
Cytoplasmic dynein 2 light intermediate chain 1.
    
 0.992
TCTEX1D2
Tctex1 domain-containing protein 2.
    
 0.975
DYNLRB1
Dynein light chain roadblock.
    
 0.970
DYNLL1
Dynein light chain.
    
 0.888
DYNLL2
Dynein light chain.
    
 0.888
DYNC2H1-2
Cytoplasmic dynein 2 heavy chain 1.
    
 0.868
DYNC2H1
Cytoplasmic dynein 2 heavy chain 1.
    
 0.868
IFT43
Intraflagellar transport protein 43.
     
 0.838
IFT74
Intraflagellar transport protein 74.
    
 0.836
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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