STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110483785Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (133 aa)    
Predicted Functional Partners:
RABGEF1
Rab5 GDP/GTP exchange factor.
    
 0.955
RAB1A
Ras-related protein Rab-1A.
   
 0.923
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
 
     0.840
RAB6A
Ras-related protein Rab-6A isoform X1.
   
 0.787
RAB41
Ras-related protein Rab-6A.
   
 0.787
RAB9A
Ras-related protein Rab-9A.
    
 0.774
RAB9B
Ras-related protein Rab-9B.
    
 0.774
RAB7B
Ras-related protein Rab-7b.
    
 0.748
RAB36
Ras-related protein Rab-36.
   
 0.736
RAB34
Ras-related protein Rab-34.
   
 0.736
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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