STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000003996annotation not available (339 aa)    
Predicted Functional Partners:
PKN2-2
Serine/threonine-protein kinase N2.
 
      0.852
PDPK1
3-phosphoinositide-dependent protein kinase 1.
    
0.730
PRKAR1A
cAMP-dependent protein kinase type I-alpha regulatory subunit.
 
   
 0.711
RHOC
Rho-related GTP-binding protein RhoC.
   
 0.643
RHOA
Transforming protein RhoA.
   
 0.643
RHOB
Rho-related GTP-binding protein RhoB.
   
 0.643
RND1
Rho-related GTP-binding protein Rho6.
   
 0.631
RND3
Rho-related GTP-binding protein RhoE.
   
 0.631
AR
Androgen receptor.
    
 0.531
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.504
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.