Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZER1Protein zer-1. (766 aa)    
Predicted Functional Partners:
CUL2
Cullin-2; Belongs to the cullin family.
    
 0.840
ELOC
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 
 0.834
ELOB
Transcription elongation factor B polypeptide 2.
    
 
 0.767
PPTC7
Protein phosphatase; Belongs to the PP2C family.
      
 0.706
VHL
Von Hippel-Lindau disease tumor suppressor.
   
  
 0.684
ZYG11A
Protein zyg-11 B.
     
0.648
FPGS
Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family.
      
 0.628
APPBP2
Amyloid protein-binding protein 2.
     
 0.583
ENSLSDP00000007484
annotation not available
    
 
 0.579
UBR4
E3 ubiquitin-protein ligase UBR4.
      
 0.571
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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