Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
BMPERBMP-binding endothelial regulator protein. (679 aa)    
Predicted Functional Partners:
CHRD
Chordin; Belongs to the chordin family.
    
 
 0.714
BMP4
Bone morphogenetic protein 4.
    
 0.709
BMP2
Bone morphogenetic protein 2.
    
 0.709
BMP6
Bone morphogenetic protein 6.
    
 0.677
KATNB1
Katanin p80 WD40 repeat-containing subunit B1; Participates in a complex which severs microtubules in an ATP-dependent manner. May act to target the enzymatic subunit of this complex to sites of action such as the centrosome. Microtubule severing may promote rapid reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation.
      
 0.593
BBS9
Protein PTHB1.
      
 0.588
ENSLSDP00000008068
annotation not available
   
  0.583
ARHGAP18
Rho GTPase-activating protein 18.
   
  
 0.573
TOMM40L
Mitochondrial import receptor subunit TOM40B.
      
 0.570
TWSG1
Twisted gastrulation 1.
      
 0.565
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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