STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D13TBC1 domain family member 13. (405 aa)    
Predicted Functional Partners:
RAB35
Ras-related protein Rab-35.
     
 0.766
IFT27
Intraflagellar transport protein 27.
     
 0.672
TBC1D10A
TBC1 domain family member 10A.
      
 0.601
SPOUT1
Putative methyltransferase C9orf114.
      
 0.567
TBC1D19
TBC1 domain family member 19.
      
 0.553
EVI5
Ecotropic viral integration site 5.
     
 0.535
LOC110473721
TBC1 domain family member 7.
      
 0.531
TBC1D23
TBC1 domain family member 23.
      
 0.519
NCKIPSD
NCK-interacting protein with SH3 domain.
   
    0.480
TBC1D25
TBC1 domain family member 25.
   
  
0.449
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.