Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RAB35Ras-related protein Rab-35. (210 aa)    
Predicted Functional Partners:
DENND1A
DENN domain-containing protein 1A.
    
 0.954
DENND1B
DENN domain-containing protein 1B.
    
 0.922
LOC110471134
Rab proteins geranylgeranyltransferase component A 2.
    
 0.912
TBC1D10A
TBC1 domain family member 10A.
   
 0.882
LOC110483785
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.866
LOC110483784
Rab GDP dissociation inhibitor beta-like.
    
 0.866
GDI2
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.866
IFT88
Intraflagellar transport protein 88.
    
 0.864
IFT52
Intraflagellar transport protein 52.
    
 0.861
IFT22
Intraflagellar transport protein 22.
    
 0.858
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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