STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDIA5Protein disulfide-isomerase A5. (534 aa)    
Predicted Functional Partners:
GAK
Cyclin-G-associated kinase.
    
 0.951
CALR
Calreticulin.
   
 0.611
MSRA
Mitochondrial peptide methionine sulfoxide reductase.
   
 0.597
HSPA5
Glucose-regulated protein; Belongs to the heat shock protein 70 family.
   
 0.572
COQ3
Hexaprenyldihydroxybenzoate methyltransferase, mitochondrial.
   
 
 0.546
METTL6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.521
HSP90B1
Endoplasmin.
   
 0.520
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
    
 0.492
ERO1A
ERO1-like protein alpha.
   
 0.485
ERO1B
ERO1-like protein beta.
   
 0.485
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.