Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCNTPericentrin. (4477 aa)    
Predicted Functional Partners:
KCNQ1
Potassium voltage-gated channel subfamily KQT member 1; Belongs to the potassium channel family.
    
 0.878
PCM1
Pericentriolar material 1 protein.
   
 0.851
PLK1
Serine/threonine-protein kinase PLK.
   
 0.848
PDE4DIP
Myomegalin.
   
 0.812
CEP290
Centrosomal protein.
   
 0.792
CEP192
Centrosomal protein.
   
 0.764
ENSLSDP00000010574
annotation not available
   
 0.757
CENPJ_0
Centromere protein J.
   
 0.757
ENSLSDP00000006067
annotation not available
   
 0.748
MAPRE1
Microtubule-associated protein RP/EB family member 1.
    
 0.730
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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