STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GSTZ1Maleylacetoacetate isomerase; Belongs to the GST superfamily. (218 aa)    
Predicted Functional Partners:
HGD
Homogentisate 1,2-dioxygenase.
 
 
 0.996
FAH
Fumarylacetoacetase.
 
 
 0.995
HPGDS
Hematopoietic prostaglandin D synthase.
    
 0.876
EPRS1
Bifunctional glutamate/proline--tRNA ligase.
   
 0.829
GSTO1
Glutathione S-transferase omega-1; Belongs to the GST superfamily.
   
 
 0.803
EEF1G
Elongation factor 1-gamma.
   
 0.795
HPDL
4-hydroxyphenylpyruvate dioxygenase-like protein.
  
  
 0.703
GSTM3
Glutathione S-transferase Mu 5.
    
 0.666
GSTM4
Glutathione S-transferase 2 isoform X1.
    
 0.666
LOC110481288
Glutathione S-transferase theta-1; Belongs to the GST superfamily.
     
 0.635
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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