Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CRATCarnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family. (627 aa)    
Predicted Functional Partners:
PEX5
Peroxisomal targeting signal 1 receptor.
   
 0.814
SCP2
Non-specific lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.792
HSDL2
Hydroxysteroid dehydrogenase-like protein 2.
   
 0.769
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial.
   
 0.766
HTD2
Hydroxyacyl-thioester dehydratase type 2, mitochondrial.
   
 0.757
RPP14
Ribonuclease P protein subunit p14.
   
 0.757
HAO2
Hydroxyacid oxidase 2.
   
 
 0.747
SLC25A20
Mitochondrial carnitine/acylcarnitine carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.730
MDH2
Malate dehydrogenase.
   
 
 0.717
PEX5L
PEX5-related protein.
   
 0.717
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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