Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC15A2Solute carrier family 15 member 2. (729 aa)    
Predicted Functional Partners:
PRL
Prolactin.
      
 0.874
ECM1
Extracellular matrix protein 1.
      
 0.874
CXorf21
Uncharacterized protein CXorf21.
    
 0.703
BMS1
Ribosome biogenesis protein BMS1.
      
 0.684
DDX52
Putative ATP-dependent RNA helicase DDX52.
      
 0.666
ROCK2
Rho-associated protein kinase; Protein kinase which is a key regulator of actin cytoskeleton and cell polarity.
     
 0.610
SLC39A13
Zinc transporter ZIP13.
    
 
 0.582
ZSWIM8
Zinc finger SWIM domain-containing protein 8.
      
 0.565
POLA1
DNA polymerase.
      
 0.565
MEP1B
Meprin A subunit.
   
  
 0.554
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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