Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPR107Protein GPR107. (552 aa)    
Predicted Functional Partners:
LRIT3
Visual pigment-like receptor peropsin; Belongs to the G-protein coupled receptor 1 family.
    
   0.697
TMEM127
Transmembrane protein 127.
   
  
 0.682
TMEM87A
Transmembrane protein 87A.
   
  
 0.570
TMEM185A
Transmembrane protein 185A.
      
 0.568
TMEM181
Transmembrane protein 181.
      
 0.566
GPR89B
Golgi pH regulator.
    
 
 0.566
GPR146
Putative G-protein coupled receptor 146.
      
 0.565
GPR158
Putative G-protein coupled receptor 158.
      
 0.563
GPR87
G protein-coupled receptor 87.
      
 0.550
GPR137C
Integral membrane protein GPR137C.
      
 0.544
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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