Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP128Centrosomal protein. (1006 aa)    
Predicted Functional Partners:
CEP104
Centrosomal protein.
      
 0.872
CFAP58
Cilia-and flagella-associated protein 58.
    
 
 0.712
SCLT1
Sodium channel and clathrin linker 1.
    
 0.712
CEP78
Centrosomal protein.
    
 
 0.704
WDR63
WD repeat-containing protein 63.
    
 0.703
CEP350
Centrosome-associated protein 350.
   
  
 0.702
CEP170
Centrosomal protein.
     
 0.692
TTC29
Tetratricopeptide repeat protein 29.
    
 
 0.687
NIN
Ninein.
   
  
 0.686
STON2
Stonin-2; Belongs to the Stoned B family.
     
 0.684
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.