Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000004261annotation not available (95 aa)    
Predicted Functional Partners:
PCID2
PCI domain-containing protein 2.
   
 
 0.915
SHFM1
26S proteasome complex subunit DSS1.
    
 
 0.773
ILVBL
Acetolactate synthase-like protein.
      
 0.749
FNBP4
Formin-binding protein 4.
   
  
 0.694
OLA1
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
      
 0.680
DFFB
DNAation factor subunit beta.
      
 0.596
ALCAM
CD166 antigen.
      
 0.589
TCERG1
Transcription elongation regulator 1.
      
 0.571
ENSLSDP00000016760
annotation not available
      
 0.567
HEATR3
HEAT repeat-containing protein 3.
      
 0.566
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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