Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PKD2L1Polycystic kidney disease 2-like 1 protein. (738 aa)    
Predicted Functional Partners:
PKD1
Polycystin 1.
 
 
 0.963
PKD1L2
Polycystic kidney disease protein 1-like 2.
    
 
 0.919
PKDREJ
Polycystic kidney disease and receptor for egg jelly-related protein.
   
 0.742
TRPC1
Short transient receptor potential channel 1; Belongs to the transient receptor (TC 1.A.4) family.
    
 
 0.688
EXOC5
Exocyst complex component 5.
     
 0.682
IBSP
Bone sialoprotein 2.
   
 
 0.597
BLOC1S2
Biogenesis of lysosome-related organelles complex 1 subunit 2.
      
 0.589
IFT20
Intraflagellar transport protein 20.
   
  
 0.583
EXOC4
Exocyst complex component 4.
     
 0.575
SCNN1G
Amiloride-sensitive sodium channel subunit gamma; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family.
      
 0.567
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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