LOC110479564 protein (Lonchura striata) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC110479564

Vasoactive intestinal polypeptide receptor 1; Belongs to the G-protein coupled receptor 2 family. (418 aa)

Predicted Functional Partners:

VIPR2

0.906

LOC110474504

0.902

GNB5

0.738

GNB1

0.737

GNB3

0.737

GNG3

0.715

GNGT2

0.713

GNG13

0.711

GNG7

0.711

GNG2

0.711

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GNB1	GNB5	ENSLSDP00000007676	ENSLSDP00000022861	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	Guanine nucleotide-binding protein subunit beta-5.	0.455
GNB1	GNG13	ENSLSDP00000007676	ENSLSDP00000001344	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13.	0.894
GNB1	GNG2	ENSLSDP00000007676	ENSLSDP00000003759	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.861
GNB1	GNG3	ENSLSDP00000007676	ENSLSDP00000009817	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.872
GNB1	GNG7	ENSLSDP00000007676	ENSLSDP00000001896	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.897
GNB1	GNGT2	ENSLSDP00000007676	ENSLSDP00000006679	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.792
GNB1	LOC110474504	ENSLSDP00000007676	ENSLSDP00000000149	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	Vasoactive intestinal polypeptide receptor 1.	0.737
GNB1	LOC110479564	ENSLSDP00000007676	ENSLSDP00000004286	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	Vasoactive intestinal polypeptide receptor 1; Belongs to the G-protein coupled receptor 2 family.	0.737
GNB1	VIPR2	ENSLSDP00000007676	ENSLSDP00000016008	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	Vasoactive intestinal polypeptide receptor 2; Belongs to the G-protein coupled receptor 2 family.	0.862
GNB3	GNB5	ENSLSDP00000016932	ENSLSDP00000022861	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	Guanine nucleotide-binding protein subunit beta-5.	0.411
GNB3	GNG13	ENSLSDP00000016932	ENSLSDP00000001344	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13.	0.862
GNB3	GNG2	ENSLSDP00000016932	ENSLSDP00000003759	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.844
GNB3	GNG3	ENSLSDP00000016932	ENSLSDP00000009817	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.872
GNB3	GNG7	ENSLSDP00000016932	ENSLSDP00000001896	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.682
GNB3	GNGT2	ENSLSDP00000016932	ENSLSDP00000006679	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.846
GNB3	LOC110474504	ENSLSDP00000016932	ENSLSDP00000000149	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	Vasoactive intestinal polypeptide receptor 1.	0.737
GNB3	LOC110479564	ENSLSDP00000016932	ENSLSDP00000004286	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	Vasoactive intestinal polypeptide receptor 1; Belongs to the G-protein coupled receptor 2 family.	0.737
GNB3	VIPR2	ENSLSDP00000016932	ENSLSDP00000016008	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	Vasoactive intestinal polypeptide receptor 2; Belongs to the G-protein coupled receptor 2 family.	0.819
GNB5	GNB1	ENSLSDP00000022861	ENSLSDP00000007676	Guanine nucleotide-binding protein subunit beta-5.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.	0.455
GNB5	GNB3	ENSLSDP00000022861	ENSLSDP00000016932	Guanine nucleotide-binding protein subunit beta-5.	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.	0.411

page 1 of 6

Server load: medium (44%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About