STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIF1ANHypoxia-inducible factor 1-alpha inhibitor. (371 aa)    
Predicted Functional Partners:
TNKS2
Poly [ADP-ribose] polymerase.
    
 
 0.901
HIF3A
Hypoxia-inducible factor 3-alpha.
    
 0.895
HIF1A
Hypoxia-inducible factor 1-alpha.
    
 0.895
EPAS1
Endothelial PAS domain-containing protein 1.
    
 0.880
NOTCH1
Neurogenic locus notch 1.
    
 
 0.859
TRPA1
Transient receptor potential cation channel subfamily A member 1.
    
   0.757
IL10RB
Interleukin-10 receptor subunit beta.
    
   0.647
TNKS
Poly [ADP-ribose] polymerase.
    
 
 0.645
PPP1R13B
Apoptosis-stimulating of p53 protein 1.
    
   0.603
VHL
Von Hippel-Lindau disease tumor suppressor.
   
 
 0.570
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.