STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000004334annotation not available (358 aa)    
Predicted Functional Partners:
ENSLSDP00000008068
annotation not available
   
 0.948
CYP51A1
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
   
 0.842
HSD17B7
3-keto-steroid reductase.
   
 0.838
FDFT1
Squalene synthase.
  
 
 0.832
SQLE
Squalene monooxygenase.
   
 
 0.829
SC5D
Lathosterol oxidase; Belongs to the sterol desaturase family.
   
 0.809
LSS
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.803
SIGMAR1
Sigma non-opioid intracellular receptor 1 isoform X1.
   
 
 0.790
ERG28
Putative ergosterol biosynthetic protein 28.
   
 
 0.781
MSMO1
Methylsterol monooxygenase 1; Belongs to the sterol desaturase family.
   
 0.766
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.