Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110479574Rab-like protein 2A. (292 aa)    
Predicted Functional Partners:
CEP19
Centrosomal protein.
   
 
 0.931
FGFR1OP
FGFR1 oncogene partner.
   
 0.774
CEP350
Centrosome-associated protein 350.
    
 0.756
RABGEF1
Rab5 GDP/GTP exchange factor.
    
 0.740
EXOC2
Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family.
    
 0.703
APPL2
DCC-interacting protein 13-beta.
    
 0.684
PI4KB
Phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
    
 0.640
RAB3IL1
Guanine nucleotide exchange factor for Rab-3A.
    
 0.632
RAB3IP
Rab-3A-interacting protein.
    
 0.632
PPP2R3C
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma.
    
   0.618
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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