STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110482110Hexosaminidase D. (562 aa)    
Predicted Functional Partners:
HEXA
Beta-hexosaminidase.
     
 0.927
HEXB
Beta-hexosaminidase.
     
 0.927
HEXD
Hexosaminidase D.
  
  
 
0.902
ADGRL3
Latrophilin-3; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.780
ADGRL2
Latrophilin-2; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.780
PDE6G
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma.
   
 0.612
GNB1
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
   
 0.579
GNB4
G protein subunit beta 4.
   
 0.579
GNB3
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3.
   
 0.579
GNB5
Guanine nucleotide-binding protein subunit beta-5.
   
 0.579
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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