Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CETN2Centrin-2. (185 aa)    
Predicted Functional Partners:
ENSLSDP00000000912
annotation not available
    
 0.936
XPC
DNA repair protein complementing XP-C cells.
    
 0.934
RAD23B
UV excision repair protein RAD23 B.
   
 0.878
POC5
Centrosomal protein POC5.
    
 
 0.872
CCP110
UPF0505 protein C16orf62.
    
 0.837
CEP164
Centrosomal protein.
    
 0.811
ERCC3
TFIIH basal transcription factor complex helicase XPB subunit.
    
 0.801
PLK1
Serine/threonine-protein kinase PLK.
    
 0.797
CEP192
Centrosomal protein.
    
 0.777
XPA
DNA repair protein complementing XP-A cells.
    
 0.758
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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