Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RITA1Uncharacterized protein. (263 aa)    
Predicted Functional Partners:
RBPJ
Suppressor of hairless.
    
 
 0.850
DCP1A
mRNA-decapping enzyme 1A.
    
   0.785
PPP2R3C
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma.
    
   0.717
MRPL15
39S ribosomal protein L15, mitochondrial.
      
 0.585
MEGF11
Multiple epidermal growth factor-like domains protein 11.
      
 0.566
RBPJL
Recombining binding protein suppressor of hairless-like protein.
    
 
 0.526
ENSLSDP00000004105
annotation not available
      
 0.510
MEGF6
Multiple epidermal growth factor-like domains protein 6.
      
 0.510
NEURL1B
E3 ubiquitin-protein ligase NEURL1B.
      
 0.453
SPEN
Msx2-interacting protein.
      
 0.430
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.