RNF40_1 protein (Lonchura striata) - STRING interaction network

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

RNF40_1

E3 ubiquitin protein ligase. (199 aa)

Predicted Functional Partners:

LEO1

0.970

UBE2A

0.803

UBE2B

0.803

RNF40

0.765

CDC73

0.722

PAF1

0.708

TRIP12

0.690

WAC

0.686

CTR9

0.667

SETD2

0.613

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CDC73	CTR9	ENSLSDP00000014038	ENSLSDP00000015815	Parafibromin.	RNA polymerase-associated protein CTR9.	0.998
CDC73	LEO1	ENSLSDP00000014038	ENSLSDP00000022885	Parafibromin.	RNA polymerase-associated protein LEO1.	0.999
CDC73	PAF1	ENSLSDP00000014038	ENSLSDP00000005749	Parafibromin.	RNA polymerase II-associated factor 1.	0.999
CDC73	RNF40	ENSLSDP00000014038	ENSLSDP00000004509	Parafibromin.	E3 ubiquitin protein ligase.	0.722
CDC73	RNF40_1	ENSLSDP00000014038	ENSLSDP00000004502	Parafibromin.	E3 ubiquitin protein ligase.	0.722
CDC73	SETD2	ENSLSDP00000014038	ENSLSDP00000001170	Parafibromin.	Histone-lysine N-methyltransferase SETD2.	0.579
CDC73	UBE2A	ENSLSDP00000014038	ENSLSDP00000006730	Parafibromin.	Ubiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family.	0.675
CDC73	UBE2B	ENSLSDP00000014038	ENSLSDP00000010173	Parafibromin.	Ubiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family.	0.675
CDC73	WAC	ENSLSDP00000014038	ENSLSDP00000002373	Parafibromin.	WW domain-containing adapter protein with coiled-coil.	0.626
CTR9	CDC73	ENSLSDP00000015815	ENSLSDP00000014038	RNA polymerase-associated protein CTR9.	Parafibromin.	0.998
CTR9	LEO1	ENSLSDP00000015815	ENSLSDP00000022885	RNA polymerase-associated protein CTR9.	RNA polymerase-associated protein LEO1.	0.999
CTR9	PAF1	ENSLSDP00000015815	ENSLSDP00000005749	RNA polymerase-associated protein CTR9.	RNA polymerase II-associated factor 1.	0.998
CTR9	RNF40	ENSLSDP00000015815	ENSLSDP00000004509	RNA polymerase-associated protein CTR9.	E3 ubiquitin protein ligase.	0.667
CTR9	RNF40_1	ENSLSDP00000015815	ENSLSDP00000004502	RNA polymerase-associated protein CTR9.	E3 ubiquitin protein ligase.	0.667
CTR9	SETD2	ENSLSDP00000015815	ENSLSDP00000001170	RNA polymerase-associated protein CTR9.	Histone-lysine N-methyltransferase SETD2.	0.676
CTR9	UBE2A	ENSLSDP00000015815	ENSLSDP00000006730	RNA polymerase-associated protein CTR9.	Ubiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family.	0.650
CTR9	UBE2B	ENSLSDP00000015815	ENSLSDP00000010173	RNA polymerase-associated protein CTR9.	Ubiquitin-conjugating enzyme E2 B; Belongs to the ubiquitin-conjugating enzyme family.	0.650
CTR9	WAC	ENSLSDP00000015815	ENSLSDP00000002373	RNA polymerase-associated protein CTR9.	WW domain-containing adapter protein with coiled-coil.	0.631
LEO1	CDC73	ENSLSDP00000022885	ENSLSDP00000014038	RNA polymerase-associated protein LEO1.	Parafibromin.	0.999
LEO1	CTR9	ENSLSDP00000022885	ENSLSDP00000015815	RNA polymerase-associated protein LEO1.	RNA polymerase-associated protein CTR9.	0.999