Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PLBD2Phospholipase B-like; Putative phospholipase. (567 aa)    
Predicted Functional Partners:
PLA2G4A
Phospholipase A2.
     
 0.582
APLP2
Amyloid-like protein 2.
      
 0.572
GLG1
Golgi apparatus protein 1.
      
 0.568
JAKMIP2
Janus kinase and microtubule-interacting protein 2.
      
 0.515
GRAP2
GRB2 related adaptor protein 2.
      
 0.504
KIAA1217
Sickle tail.
      
 0.476
PRDX6
Peroxiredoxin-6.
      
 0.473
RFTN2
Raftlin-2.
      
 0.442
LOC110470994
Betaine--homocysteine S-methyltransferase 1; Involved in the regulation of homocysteine metabolism.
      
 0.437
FICD
Adenosine monophosphate-protein transferase FICD.
      
 0.433
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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