STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YEATS4YEATS domain-containing protein 4. (227 aa)    
Predicted Functional Partners:
DMAP1
DNA methyltransferase 1-associated protein 1.
   
 0.983
RUVBL1
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.981
MEAF6
Chromatin modification-related protein MEAF6.
    
 0.980
MORF4L1
Mortality factor 4-like protein 1.
    
 0.978
VPS72
Vacuolar protein sorting-associated protein 72.
    
 0.969
TRRAP
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
   
 0.968
RUVBL2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
 0.967
EPC1
Enhancer of polycomb homolog.
   
 0.964
EP400
E1A-binding protein p400.
    
 0.960
EPC2
Enhancer of polycomb homolog.
   
 0.959
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.