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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD13DAnkyrin repeat domain-containing protein 13D. (518 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin-60S ribosomal protein L40.
    
   0.757
LRRC73
Leucine-rich repeat-containing protein 73.
      
 0.620
TEPSIN
AP-4 complex accessory subunit tepsin.
      
 0.613
LOC110471805
Ubiquitin.
    
   0.603
NPRL2
Nitrogen permease regulator 2-like protein.
      
 0.569
POLR3H
DNA-directed RNA polymerase III subunit RPC8.
      
 0.554
DOCK3
Dedicator of cytokinesis protein 3; Belongs to the DOCK family.
      
 0.529
CUNH9orf16
UPF0184 protein C9orf16.
      
 0.476
PFDN2
Prefoldin subunit 2.
      
 0.408
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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