Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ANKRD13DAnkyrin repeat domain-containing protein 13D. (518 aa)    
Predicted Functional Partners:
LRRC73
Leucine-rich repeat-containing protein 73.
      
 0.864
TEPSIN
AP-4 complex accessory subunit tepsin.
      
 0.791
TMPRSS12
Transmembrane protease serine 12; Belongs to the peptidase S1 family.
      
 0.751
NPRL2
Nitrogen permease regulator 2-like protein.
      
 0.685
POLR3H
DNA-directed RNA polymerase III subunit RPC8.
      
 0.682
FAM189B
Protein FAM189B.
    
   0.593
DOCK3
Dedicator of cytokinesis protein 3; Belongs to the DOCK family.
      
 0.591
LOC110485005
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
      
 0.567
CUNH9orf16
UPF0184 protein C9orf16.
      
 0.551
SCYL3
Protein-associating with the carboxyl-terminal domain of ezrin.
      
 0.545
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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