RBM19 protein (Lonchura striata) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

RBM19

Putative RNA-binding protein 19. (943 aa)

Predicted Functional Partners:

BMS1

0.992

PWP2

0.981

AATF

0.962

DDX10

0.953

FTSJ3

0.949

DDX56

0.949

GNL3

0.948

PDCD11

0.947

IMP4

0.940

ENSLSDP00000005175

0.940

Your Current Organism:

Lonchura striata

NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AATF	BMS1	ENSLSDP00000011982	ENSLSDP00000016471	Protein AATF.	Ribosome biogenesis protein BMS1.	0.995
AATF	DDX10	ENSLSDP00000011982	ENSLSDP00000024914	Protein AATF.	RNA helicase.	0.967
AATF	DDX56	ENSLSDP00000011982	ENSLSDP00000010763	Protein AATF.	Putative ATP-dependent RNA helicase DDX56.	0.939
AATF	ENSLSDP00000005175	ENSLSDP00000011982	ENSLSDP00000005175	Protein AATF.	U3 small nucleolar ribonucleoprotein protein IMP4-like.	0.932
AATF	FTSJ3	ENSLSDP00000011982	ENSLSDP00000004322	Protein AATF.	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.925
AATF	GNL3	ENSLSDP00000011982	ENSLSDP00000018181	Protein AATF.	Guanine nucleotide-binding protein-like 3.	0.710
AATF	IMP4	ENSLSDP00000011982	ENSLSDP00000002347	Protein AATF.	U3 small nucleolar ribonucleoprotein IMP4.	0.932
AATF	PDCD11	ENSLSDP00000011982	ENSLSDP00000006836	Protein AATF.	Protein RRP5.	0.988
AATF	PWP2	ENSLSDP00000011982	ENSLSDP00000011404	Protein AATF.	Periodic tryptophan protein 2.	0.987
AATF	RBM19	ENSLSDP00000011982	ENSLSDP00000004550	Protein AATF.	Putative RNA-binding protein 19.	0.962
BMS1	AATF	ENSLSDP00000016471	ENSLSDP00000011982	Ribosome biogenesis protein BMS1.	Protein AATF.	0.995
BMS1	DDX10	ENSLSDP00000016471	ENSLSDP00000024914	Ribosome biogenesis protein BMS1.	RNA helicase.	0.938
BMS1	DDX56	ENSLSDP00000016471	ENSLSDP00000010763	Ribosome biogenesis protein BMS1.	Putative ATP-dependent RNA helicase DDX56.	0.796
BMS1	ENSLSDP00000005175	ENSLSDP00000016471	ENSLSDP00000005175	Ribosome biogenesis protein BMS1.	U3 small nucleolar ribonucleoprotein protein IMP4-like.	0.945
BMS1	FTSJ3	ENSLSDP00000016471	ENSLSDP00000004322	Ribosome biogenesis protein BMS1.	pre-rRNA processing protein FTSJ3; Probable methyltransferase involved in the processing of the 34S pre-rRNA to 18S rRNA and in 40S ribosomal subunit formation. Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.	0.969
BMS1	GNL3	ENSLSDP00000016471	ENSLSDP00000018181	Ribosome biogenesis protein BMS1.	Guanine nucleotide-binding protein-like 3.	0.932
BMS1	IMP4	ENSLSDP00000016471	ENSLSDP00000002347	Ribosome biogenesis protein BMS1.	U3 small nucleolar ribonucleoprotein IMP4.	0.945
BMS1	PDCD11	ENSLSDP00000016471	ENSLSDP00000006836	Ribosome biogenesis protein BMS1.	Protein RRP5.	0.999
BMS1	PWP2	ENSLSDP00000016471	ENSLSDP00000011404	Ribosome biogenesis protein BMS1.	Periodic tryptophan protein 2.	0.998
BMS1	RBM19	ENSLSDP00000016471	ENSLSDP00000004550	Ribosome biogenesis protein BMS1.	Putative RNA-binding protein 19.	0.992