Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SFMBT2Scm-like with four MBT domains protein 2. (893 aa)    
Predicted Functional Partners:
SFMBT1
Scm-like with four MBT domains protein 1.
  
 
 
0.904
SLC38A4
Sodium-coupled neutral amino acid transporter 4.
      
 0.874
JADE1
Protein Jade-1.
      
 0.693
HMG20A
High mobility group protein 20A.
    
 
 0.650
GATM
Glycine amidinotransferase, mitochondrial.
    
 
 0.631
YAF2
YY1-associated factor 2.
    
 0.629
RYBP
RING1 and YY1-binding protein.
    
 0.629
NAP1L4
Nucleosome assembly protein 1-like 4; Belongs to the nucleosome assembly protein (NAP) family.
    
 
 0.619
RNF2
E3 ubiquitin-protein ligase RING2.
    
 0.571
TSSC4
Protein TSSC4.
      
 0.565
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: low (22%) [HD]