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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000004582annotation not available (133 aa)    
Predicted Functional Partners:
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.668
MT-CO2
Mitochondrially encoded cytochrome c oxidase II.
    
 0.659
BHLHE41
Class E basic helix-loop-helix protein 41.
    
 0.640
HLF
Hepatic leukemia factor.
    
 
0.595
LOC110482504
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.588
COX5B
Cytochrome c oxidase subunit 5B, mitochondrial.
   
 0.580
CUNH1orf198
Uncharacterized protein C1orf198.
   
 0.580
ATF4
Cyclic AMP-dependent transcription factor ATF-4.
   
 0.570
PER2
Period circadian 2.
   
 0.570
LOC110474501
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
   
 0.569
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.