STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSLSDP00000004585annotation not available (126 aa)    
Predicted Functional Partners:
LAMP2
Lysosome-associated membrane glycoprotein 2.
    
 0.864
LAMP1
Lysosome-associated membrane glycoprotein 1.
   
 0.716
CD9
Tetraspanin.
   
 
 0.714
ANXA2
Annexin.
   
  
 0.691
RAB27A
Ras-related protein Rab-27A.
     
 0.683
CD82
Tetraspanin.
    
 
 0.677
TSG101
Tumor susceptibility gene 101 protein.
      
 0.662
HSPA4
Heat shock protein 4.
      
 0.650
ANXA11
Annexin.
   
  
 0.648
ANXA1
Annexin.
   
  
 0.625
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.