STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KINDNA/RNA-binding protein KIN17. (390 aa)    
Predicted Functional Partners:
METTL22
Methyltransferase-like protein 22.
    
 0.856
SF3A2
Splicing factor 3A subunit 2.
    
 
 0.741
SF3A3
Splicing factor 3A subunit 3.
    
 
 0.740
SF3B1
Splicing factor 3B subunit 1.
    
   0.603
SF3B3
Splicing factor 3B subunit 3.
    
   0.603
EEF2KMT
Protein-lysine N-methyltransferase EEF2KMT.
    
 0.587
RBMX2
RNA-binding motif protein, X-linked 2-like.
   
   0.569
LOC110477970
RNA-binding motif protein, X-linked 2.
   
   0.569
BUD13
BUD13.
   
   0.554
ZMAT2
Zinc finger matrin-type protein 2.
   
 
 0.540
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.