Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ACADVLVery long-chain specific acyl-CoA dehydrogenase, mitochondrial. (555 aa)    
Predicted Functional Partners:
NDUFAF1
Complex I intermediate-associated protein 30, mitochondrial.
   
 0.958
ZNF653
Zinc finger protein 653.
   
 0.952
NDUFS2
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial; Belongs to the complex I 49 kDa subunit family.
   
 0.894
TIMMDC1
Complex I assembly factor TIMMDC1, mitochondrial.
    
 0.891
NDUFS7
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial; Belongs to the complex I 20 kDa subunit family.
   
 0.886
NDUFS3
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial; Belongs to the complex I 30 kDa subunit family.
   
 0.855
NDUFAF3
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3.
   
 0.853
NDUFA13
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13.
   
 0.825
ECI2
Enoyl-CoA delta isomerase 2, mitochondrial.
  
 0.822
NDUFAF4
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4.
    
 0.816
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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