STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPN1SWUltraviolet-sensitive opsin. (348 aa)    
Predicted Functional Partners:
SAMD7
Sterile alpha motif domain containing 7.
     
 0.664
GNG11
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.630
OPSR
Red-sensitive opsin; Belongs to the G-protein coupled receptor 1 family.
   
 
0.621
LOC110477039
Opsin-VA.
   
 
0.621
LOC110471058
C-C chemokine receptor type 1-like.
      
0.615
FBXL7
F-box/LRR-repeat protein 7.
      
 0.588
RGR
RPE-retinal G protein-coupled receptor; Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.
   
 
0.568
NEK2
Serine/threonine-protein kinase Nek2.
    
 0.548
ANAPC1
Anaphase-promoting complex subunit 1.
      
 0.542
CRYBB2
Beta-crystallin B2; Belongs to the beta/gamma-crystallin family.
   
  
 0.537
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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