Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD33Ankyrin repeat domain-containing protein 33. (334 aa)    
Predicted Functional Partners:
SLC16A12
Monocarboxylate transporter 12.
    
 
 0.543
RNF126
E3 ubiquitin-protein ligase RNF126.
    
 
 0.504
PARD6B
Partitioning defective 6 beta.
   
 0.469
PARD6A
Partitioning defective 6 alpha.
   
 0.469
PARD6G
Partitioning defective 6 gamma.
   
 0.469
PARD3
Partitioning defective 3.
   
 0.464
PARD3B_1
Partitioning defective 3 B.
   
 0.464
PARD3B
Partitioning defective 3 B.
   
 0.464
LRIT2
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2.
    
 0.457
REEP6
Receptor expression-enhancing protein.
      
 0.449
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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