STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110484630Leucine-rich repeat-containing protein 14-like. (199 aa)    
Predicted Functional Partners:
COPS5
COP9 signalosome complex subunit 5.
    
   0.715
COPS3
COP9 signalosome complex subunit 3.
    
   0.683
CHUK
Inhibitor of nuclear factor kappa-B kinase subunit alpha.
    
  0.605
IKBKB
Inhibitor of nuclear factor kappa-B kinase subunit beta.
    
  0.563
COPS6
COP9 signalosome complex subunit 6.
    
   0.542
ALG12
Mannosyltransferase.
   
  
 0.526
YDJC
Carbohydrate deacetylase.
  
 
 0.472
PIK3IP1
Phosphoinositide-3-kinase-interacting protein 1.
      
 0.468
PIGL
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase.
     
 0.434
PREPL
Prolyl endopeptidase-like.
      
 0.433
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.