STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPS18B28S ribosomal protein S18b, mitochondrial. (215 aa)    
Predicted Functional Partners:
MRPS22
28S ribosomal protein S22, mitochondrial.
   
 0.990
MRPS33
28S ribosomal protein S33, mitochondrial.
   
 0.983
DAP3
28S ribosomal protein S29, mitochondrial.
   
 0.980
MRPS31
28S ribosomal protein S31, mitochondrial.
   
 0.979
MRPS18C
28S ribosomal protein S18c, mitochondrial; Belongs to the bacterial ribosomal protein bS18 family.
   
 0.978
MRPS27
28S ribosomal protein S27, mitochondrial.
   
 0.978
MRPS7
28S ribosomal protein S7, mitochondrial.
   
 0.972
MRPS28
28S ribosomal protein S28, mitochondrial.
   
 0.968
MRPS10
28S ribosomal protein S10, mitochondrial.
   
 0.967
MRPS9
28S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
   
 0.966
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.