Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNPO3Transportin-3. (925 aa)    
Predicted Functional Partners:
CPSF6
Cleavage and polyadenylation specificity factor subunit 6.
   
 0.974
TNPO1
Transportin-1.
   
 0.970
KPNB1
Importin subunit beta-1.
   
 
 0.964
IPO5
Importin-5.
   
 
 0.961
IPO11
Importin-11.
   
 
 0.960
IPO8
Importin-8.
   
 
 0.953
IPO7
Importin-7.
   
 
 0.953
IPO13
Importin-13.
     
0.952
IPO9
Importin-9.
   
 
 0.944
PPIA
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.913
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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