Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
PPP1R10Protein phosphatase 1 regulatory subunit 10. (644 aa)    
Predicted Functional Partners:
SETD4
SET domain-containing protein 4.
    
 0.878
PPP1CA
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.857
PPP1CC
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.857
WDR82
WD repeat-containing protein 82.
   
 0.829
PPP1CB
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
 0.819
UNC79
Protein unc-79.
    
 0.634
ENSLSDP00000013904
T-cell immunoglobulin and mucin domain-containing protein 4.
    
 0.619
ST6GAL2
Beta-galactoside alpha-2,6-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
      
 0.607
LOC110478387
High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.595
SLC5A7
High affinity choline transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.595
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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