STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110481339Carbonic anhydrase 15; Belongs to the alpha-carbonic anhydrase family. (334 aa)    
Predicted Functional Partners:
RPF2
Ribosome production factor 2.
   
 
 0.573
RPL5
60S ribosomal protein L5.
    
 
 0.489
CA14
Carbonic anhydrase 14; Belongs to the alpha-carbonic anhydrase family.
  
  
0.476
GRWD1
Glutamate-rich WD repeat-containing protein 1.
   
  
 0.470
NLE1
Notchless 1.
   
  
 0.414
RPL11
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.404
P2RY1
P2Y purinoceptor 1; Belongs to the G-protein coupled receptor 1 family.
   
    0.400
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.