STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOLC1Nucleolar and coiled-body phosphoprotein 1. (666 aa)    
Predicted Functional Partners:
NOP56
Nucleolar protein 56.
   
 
 0.974
NOP58
Nucleolar protein 58.
   
 
 0.970
DKC1
H/ACA ribonucleoprotein complex subunit 4.
   
 
 0.967
RSL1D1
Ribosomal L1 domain-containing protein 1.
   
 
 0.929
GNL3
Guanine nucleotide-binding protein-like 3.
   
 
 0.851
POLR1B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.845
LTV1
Protein LTV1.
   
    0.819
NOC2L
Nucleolar complex protein 2.
   
  
 0.788
NOL6
Nucleolar protein 6.
   
  
 0.781
P2RY1
P2Y purinoceptor 1; Belongs to the G-protein coupled receptor 1 family.
   
   0.776
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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