Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GPR141Putative G-protein coupled receptor 141. (319 aa)    
Predicted Functional Partners:
TRMT9B
Putative tRNA methyltransferase 9-like protein.
      
 0.714
EPDR1
Mammalian ependymin-related protein 1.
      
 0.585
LOC110477495
Putative G-protein coupled receptor 88.
      
 0.571
AOAH
Acyloxyacyl hydrolase.
      
 0.549
THAP5
THAP domain-containing protein 5.
      
 0.533
STXBP3
Syntaxin-binding protein 3; Belongs to the STXBP/unc-18/SEC1 family.
    
   0.526
POLB
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
      
 0.522
NME8
Thioredoxin domain-containing protein 3; Belongs to the NDK family.
      
 0.456
TMEM171
Transmembrane protein 171.
      
 0.419
ANLN
Actin-binding protein anillin.
      
 0.417
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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