Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CARNS1Carnosine synthase 1. (936 aa)    
Predicted Functional Partners:
CARNMT1
UPF0586 protein C9orf41.
     
 0.967
CNDP2
Cytosolic non-specific dipeptidase.
  
 
 0.953
GADL1
Acidic amino acid decarboxylase GADL1.
     
 0.931
CSAD
Cysteine sulfinic acid decarboxylase.
     
 0.931
LOC110480616
Histamine N-methyltransferase.
     
 0.930
GAD1
Glutamate decarboxylase 1.
     
 0.914
GAD2
Glutamate decarboxylase 2.
     
 0.910
AGMAT
Agmatinase, mitochondrial.
    
 0.907
ABAT
4-aminobutyrate aminotransferase, mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.906
HDC
Histidine decarboxylase.
     
 0.905
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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