STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC39A11Zinc transporter ZIP11. (304 aa)    
Predicted Functional Partners:
SLC30A9
Zinc transporter 9.
     
 0.678
SLC39A9
Zinc transporter ZIP9.
    
 
 0.662
SLC30A6
Zinc transporter 6.
   
 0.594
SLC30A7
Zinc transporter 7.
   
 0.592
SLC39A3
Zinc transporter ZIP3.
   
 0.583
SLC39A1
Zinc transporter ZIP1.
   
 0.583
SLC39A12
Zinc transporter ZIP12.
    
 
 0.560
SLC30A4
Zinc transporter 4.
   
 0.557
SLC39A13
Zinc transporter ZIP13.
      
 0.556
SLC30A10
Zinc transporter 10.
   
 0.540
Your Current Organism:
Lonchura striata
NCBI taxonomy Id: 299123
Other names: Bengalese finch, L. striata domestica, Lonchura domestica, Lonchura striata domestica, society finch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.